Access Financials: Documents are showing as entered by user Y when verified by user X

The integration between Access Capture and Access Financials uses technology called an API.
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This sends code from one application (Access Capture) to another (Access Financials).
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As part of the integration process a separate stage in the process sees the document from Access Capture uploaded to Access Document. Where it is then visible from the transaction within Financials.
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It all depends on the your particular set up and how your consultant setup the integration. Usually the Administrator Account is used as the 'integration' user and will therefore be the UserName/UserID appearing on the Initial Insert of the Invoice and as the User Uploaded By in Access Document.
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This is by design and is all dependent on the initial setup as to who appears as the Uploaded By user in Access Document.